Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819557.1_cds_XP_016500105.1_13963
CDS Infomation

[gene=LOC107818581] [db_xref=GeneID:107818581] [protein=pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like] [protein_id=XP_016500105.1] [location=complement(36804..38957)] [gbkey=CDS]
Sequence

ATGCTGAAAAGGTCGAAACTTTTGATTCACATACGTGAAGAGCTAGGAACTCTGTATAAG
AATCCTTCTTTTGCATTTTGTACTTGTATGACTGATGACAAGTGTGGTAACGCTAAAGGC
AGTGGTGGGTCGGAGTCCGAGAATGAATGGGAAAGATTGCTTAAGCCTTTTAACCTCAAG
CAACTCCAAAGATCACTTAATAAAATTACCCCGTATCAGCTCAATAAATTATTGGCACTG
CCTTTGGATGTACCAACATCGATGGAGCTATTCCAGTGGGCCGGTAGCCAGACGAGCTAT
TGCCACTCATTTGATGTCTACTATACTTTGATTGACAAACTTGGGACTGCCAAGGAATTT
AAGATTATAGATAGATTGTTATTACAGATGAAAGATGAAGGGGTAGTTTTCAAAGAGTCC
CTCTTTATTGTGATAATGAAGCATTATGGAAGAGCTGGTTTACCAGGGCAGGCAACTAGA
ATACTATTGGATATGTTGAATACTTTCTCTTGTGAACCCACATTTAAGTCATACAATCAA
GTATTGGATATTCTGTTGGCTGAAAATTGTCCAAAAGTTGCTCCGAATGTGTTTTATGAA
ATGTTAGGGAAAGGTATTTCTCCTTCTGTATTCACTTTTTCTCGAGTGATACAAGCATTA
TGTATAGTCAATGAGGTAGACTCTGCTTGTTCACTTCTTAGAGACATGACAAAACATGGG
TGTGTACCAAATTCAGTGATTTACCAGATTCTTATTCGTGCACTTTCAAAGTCTGATAGG
GTAAATGATGCATTGAAACTTTTGGAGGAGATGTTTCTTATGGGTTGCATACCCGACATC
AATACTTTCAATGACATTATCCATGGGCTTTGTCGAGCTGATAGGATTCATGAGGCTGCA
AAACTGGTGGATCGGATGCTTCTCCGAGGTTTCACCCCCGATGCTATAACTTATGGCTTT
CTGATGCATGCTTTATGTCGAACAGGGCAAGTTGATGAAGCAAGGGTTCTTCTCAACAAA
GCACCTGAGCAGAATAATATCATCTTTAATATGTTGATTAATGGCTATGTGACTAATGGA
CGGTTTGATGAAGCAAAAGCCATTCTGAATGAGAACATGTTGATTAAAGGTTATCAACCA
GATGTTTATACATACAACATTCTGATTCGAGGTCTTTGCAAGAAGGGATCTTTGTCTTCG
GCTCATGAAGTTGTAAAAGAAATGTCATCCGATGGTTGCCAGCCCAATGTGATCACATAC
ACAACCTTGATTGATGGCTTCTCCAAGGCTGGCCGTCTACAGGAAGCTTATGACCTTGTT
ACTGAGATGTCAGCAAAAGGTCTCAGCCTAAATGTAGTGGGTTTTAACTCTCTTATATCA
GCTTTGTGTAAACAAGGAATGATTCAACAGGCATTAGAAATTTTTGGTGATATGTCAAGC
AAAGGATGTAAACCAGACATTTTCACATTCAATGCTTTGATTTCAGGTTTTTGCAAGGTA
GACAAGATGGGTGAAGCATTGGGGATGTATCGAGATATGTTCCTTGAGGGAGTTATTGCC
AATACAGTTACCTACAACACATTGATTCATGCTTTCTTGAGGAAAGGTAAAACCCAAGAG
GCGCTTAAGCTTGTGAATGATATGCTATTCAGAGGATGTCCCCTTGATGAAATCACATAC
AATGGCCTCGTAAAAGCACTTTGTAATGATGGAGCAATTGAGAGAGCAGTTGGACTTTTT
GAAGAAATGCTGACAAAGGGAATAAAACCTAATCATGTAACACGCAACATCTTGGTCAAT
GGCTTTTGTAGAATAGGGAAGGTTCAAAATGCCCTTGAGTTTCTGAGAGACCTGGTACAT
CGTGGATTGACACCTGATATAGTCACGTACAACAGTCTGATAAATGGCTTTTGTAACAAT
GGTCGAATTCGAGAAGCTCACAACCTCTTTGAAAAATTAGAAGTTGAAGGAGTTTGTGCT
GATACTTTCACTTATAACACCTTGATTTCTTCCTATTGTAAAATGCACATGCTTGATGAT
GCTTATACCCTGCTTACTAGAGGCATAGCTGTTGGTTTCATTCCCAATAATGTCACATGG
TACATACTGGTGAGAAATTTTGTTCGAAAGAGTTATGAGTCAGTAACGAGGTAG

Peptide Sequence

PEP ID

XP_016500105.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Nicotiana tabacum]
Sequence

MLKRSKLLIHIREELGTLYKNPSFAFCTCMTDDKCGNAKGSGGSESENEWERLLKPFNLK
QLQRSLNKITPYQLNKLLALPLDVPTSMELFQWAGSQTSYCHSFDVYYTLIDKLGTAKEF
KIIDRLLLQMKDEGVVFKESLFIVIMKHYGRAGLPGQATRILLDMLNTFSCEPTFKSYNQ
VLDILLAENCPKVAPNVFYEMLGKGISPSVFTFSRVIQALCIVNEVDSACSLLRDMTKHG
CVPNSVIYQILIRALSKSDRVNDALKLLEEMFLMGCIPDINTFNDIIHGLCRADRIHEAA
KLVDRMLLRGFTPDAITYGFLMHALCRTGQVDEARVLLNKAPEQNNIIFNMLINGYVTNG
RFDEAKAILNENMLIKGYQPDVYTYNILIRGLCKKGSLSSAHEVVKEMSSDGCQPNVITY
TTLIDGFSKAGRLQEAYDLVTEMSAKGLSLNVVGFNSLISALCKQGMIQQALEIFGDMSS
KGCKPDIFTFNALISGFCKVDKMGEALGMYRDMFLEGVIANTVTYNTLIHAFLRKGKTQE
ALKLVNDMLFRGCPLDEITYNGLVKALCNDGAIERAVGLFEEMLTKGIKPNHVTRNILVN
GFCRIGKVQNALEFLRDLVHRGLTPDIVTYNSLINGFCNNGRIREAHNLFEKLEVEGVCA
DTFTYNTLISSYCKMHMLDDAYTLLTRGIAVGFIPNNVTWYILVRNFVRKSYESVTR

Transcript Sequence

Gene sequence data has not been registered.